BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F02SP1|AL427926
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig226 1692 0.0
3x_Contig914 197 4e-50
>3x_Contig226
Length = 1863
Score = 1692 bits (851), Expect = 0.0
Identities = 901/915 (98%), Gaps = 6/915 (0%)
Strand = Plus / Minus
Query: 1 aatctctccatgaktacacgtctttttgtctgaaggaggcattgtcatcgaaaccgaact 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 aatctctccatgagtacacgtctttttgtctgaaggaggcattgtcatcgaaaccgaact 854
Query: 61 tggcatccatacacatgaccttcttatcctggtcaagaacttcactcaatgggttaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tggcatccatacacatgaccttcttatcctggtcaagaacttcactcaatgggttaattt 794
Query: 121 cgatttgagtagcatccttttccttgaagatcttatataacttcaagactgcatccttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cgatttgagtagcatccttttccttgaagatcttatataacttcaagactgcatccttag 734
Query: 181 catcagcttcggcttccttggagaaacccaagagaggcaagacaatactcagcagcagtt 240
|||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct: 733 catcagcttcggcttccttggagaaacccaag-gaggcag--caat-ctcagcagcagtt 678
Query: 241 tctggaagatcaatccaacggaatcttcgacgtagaacttcttgatagcatctgggttgg 300
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tctgg--ggtcaatccaacggaatcttcgacgtagaacttcttgatagcatctgggttgg 620
Query: 301 tctttgccacatcttcgatattcataccaccttcactagagcaaatgatcaatggcttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tctttgccacatcttcgatattcataccaccttcactagagcaaatgatcaatggcttct 560
Query: 361 tagtctttctgtccatcaagatagacaaataagcttcgtgtttggcattcactctttcga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tagtctttctgtccatcaagatagacaaataagcttcgtgtttggcattcactctttcga 500
Query: 421 caatgtaaacaccggacactaacttacccttaataccagattgcttggtgatcaaatggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 caatgtaaacaccggacactaacttacccttaataccagattgcttggtgatcaaatggt 440
Query: 481 aaccaagcatcttaccactgacttcagtagcatcttgcacagaatcgatcatatggatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaccaagcatcttaccactgacttcagtagcatcttgcacagaatcgatcatatggatac 380
Query: 541 cagattgcataccgttatcgaaatgacctttacctctaccaccggtcaaagcttgagcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cagattgcataccgttatcgaaatgacctttacctctaccaccggtcaaagcttgagcct 320
Query: 601 tgacgaccaagttcttaccacccaattccttggcaatcttggtagcctcatcgacggtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgacgaccaagttcttaccacccaattccttggcaatcttggtagcctcatcgacggtat 260
Query: 661 gagcagctgcaccttttggagtaccaacgccgtattgtctcaacagttcagccgaacggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagcagctgcaccttttggagtaccaacgccgtattgtctcaacagttcagccgaacggt 200
Query: 721 attcgtggatggacaagtttctaacttgttgacgaacaacagaagaagacttgtgcaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 attcgtggatggacaagtttctaacttgttgacgaacaacagaagaagacttgtgcaaac 140
Query: 781 agcttcttaatttgtaagcttgcgacaacatagtgtatgataattctatagtagttcacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 agcttcttaatttgtaagcttgcgacaacatagtgtatgataattctatagtagttcacg 80
Query: 841 gagkagaagaagacagtttcgttaagccaaaaaaaaaaagamaccgtttatattatgtat 900
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79 gagtgagagaagacagtttcgttaagccaaaaaaaaaaagacaccgtttatattatgtat 20
Query: 901 tatgtttcgtatctt 915
|||||||||||||||
Sbjct: 19 tatgtttcgtatctt 5
>3x_Contig914
Length = 2833
Score = 197 bits (99), Expect = 4e-50
Identities = 100/101 (99%)
Strand = Plus / Plus
Query: 884 ccgtttatattatgtattatgtttcgtatcttctttccaatctcctattctttatctggg 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 ccgtttatattatgtattatgtttcgtatcttctttccaatctcctattctttatctggg 73
Query: 944 grtctggagtttataaatgaatcaaattaaagaacgaaaaa 984
| |||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gatctggagtttataaatgaatcaaattaaagaacgaaaaa 114
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,162
Number of Sequences: 1807
Number of extensions: 12162
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 2
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)